Advanced Course: R programming and development

On 15-16 January 2015 we are hosting the Advanced Course: R programming and development.

The course will focus on two aspects of R programming and development.
The first part will introduce object-oriented programming using R’s S3 and S4 system and describe how to define classes, generic functions and methods. It will also present how to create Bioconductor-compliant R packages and document them. The second part will focus on various advanced topics in R programming such as unit testing, debugging, profiling and calling C/C++ code. It will also describe how to write efficient and elegant code using vectorisation, parallelization, and the functional programming paradigm. Finally, creating web applications with shiny will be discussed.

These topics will be illustrated using a small real-life bioinformatic case study. Participants will produce, at the end of the course, a fully fledged Bioconductor compliant R package.